DDX58 | Probable ATP-dependent RNA helicase DDX58
 
image/svg+xmlExtracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion None Substrate Localization legend

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Sequence Viewer
Gene
Synonyms
-
Protein Name
Probable ATP-dependent RNA helicase DDX58
UniProt ID
O95786 [go to UniProt ] [go to PDBe-KB ]
Ensembl Gene ID
NCBI Gene ID
Molecular Weight
106600
Protein Length
925
Protein Domain
3D Structure
(PDB ID : 2lwd)
Target by Small Molecules
Protein-protein Interaction Database
Gene Expression
Drugs and Diseases
Enzyme Class
3.6.4.13; (BRENDA)
Catalytic Site
Catalytic Activity
ATP + H2O = ADP + H(+) + phosphate
Localization
Cytoplasm,Cell projection,Ruffle membrane,Cytoplasm,Cytoskeleton,Cell junction,Tight junction;
Function
Innate immune receptor which acts as a cytoplasmic sensor of viral nucleic acids and plays a major role in sensing viral infection and in the activation of a cascade of antiviral responses including the induction of type I interferons and proinflammatory cytokines. Its ligands include: 5'-triphosphorylated ssRNA and dsRNA and short dsRNA (<1 kb in length). In addition to the 5'-triphosphate moiety, blunt-end base pairing at the 5'-end of the RNA is very essential. Overhangs at the non-triphosphorylated end of the dsRNA RNA have no major impact on its activity. A 3'overhang at the 5'triphosphate end decreases and any 5'overhang at the 5' triphosphate end abolishes its activity. Upon ligand binding it associates with mitochondria antiviral signaling protein (MAVS/IPS1) which activates the IKK-related kinases: TBK1 and IKBKE which phosphorylate interferon regulatory factors: IRF3 and IRF7 which in turn activate transcription of antiviral immunological genes, including interferons (IFNs); IFN-alpha and IFN-beta. Detects both positive and negative strand RNA viruses including members of the families Paramyxoviridae: Human respiratory syncytial virus and measles virus (MeV), Rhabdoviridae: vesicular stomatitis virus (VSV), Orthomyxoviridae: influenza A and B virus, Flaviviridae: Japanese encephalitis virus (JEV), hepatitis C virus (HCV), dengue virus (DENV) and west Nile virus (WNV). It also detects rotavirus and reovirus. Also involved in antiviral signaling in response to viruses containing a dsDNA genome such as Epstein-Barr virus (EBV). Detects dsRNA produced from non-self dsDNA by RNA polymerase III, such as Epstein-Barr virus-encoded RNAs (EBERs). May play important roles in granulocyte production and differentiation, bacterial phagocytosis and in the regulation of cell migration.
Gene Ontology
GO:0015629; GO:0005923; GO:0005737; GO:0005829; GO:0032587; GO:0005524; GO:0003690; GO:0003725; GO:0004386; GO:0042802; GO:0003727; GO:0031625; GO:0008270; GO:0071360; GO:0039528; GO:0051607; GO:0009597; GO:0045087; GO:0032480; GO:0002230; GO:0051091; GO:0010628; GO:0032725; GO:0032727; GO:1902741; GO:0032728; GO:0035549; GO:0032755; GO:2000778; GO:0032757; GO:0002735; GO:0060760; GO:0045944; GO:1904469; GO:0016579; GO:0030334; GO:0034344; GO:0043330; GO:0009615; GO:0039529; GO:0016032
 
Gene Ontology